CDS

Accession Number TCMCG047C00247
gbkey CDS
Protein Id GFP78812.1
Location join(6468129..6468538,6468998..6469345,6469419..6469460,6470546..6470708,6470863..6470973,6472210..6472278,6472757..6472843,6473084..6473947)
Organism Phtheirospermum japonicum
locus_tag PHJA_000024700

Protein

Length 697aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJDB3858 BioSample:SAMD00029051
db_source BMAC01000001.1
Definition 30-kda cleavage and polyadenylation specificity factor 30 [Phtheirospermum japonicum]
Locus_tag PHJA_000024700

EGGNOG-MAPPER Annotation

COG_category AT
Description YT521-B-like domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K14404        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03015        [VIEW IN KEGG]
ko05164        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
map05164        [VIEW IN KEGG]
GOs GO:0002682        [VIEW IN EMBL-EBI]
GO:0002684        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0004521        [VIEW IN EMBL-EBI]
GO:0004540        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005516        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005847        [VIEW IN EMBL-EBI]
GO:0005849        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006378        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006979        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010363        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010941        [VIEW IN EMBL-EBI]
GO:0010942        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031124        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031349        [VIEW IN EMBL-EBI]
GO:0031440        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034052        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043067        [VIEW IN EMBL-EBI]
GO:0043068        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043631        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045088        [VIEW IN EMBL-EBI]
GO:0045089        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0050684        [VIEW IN EMBL-EBI]
GO:0050776        [VIEW IN EMBL-EBI]
GO:0050778        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0080135        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090502        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1900363        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:2000031        [VIEW IN EMBL-EBI]
GO:2001023        [VIEW IN EMBL-EBI]
GO:2001038        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATGATGGAGAAGGGGGTTTAAGCTTTGATTTCGAGGGCGGGCTGGACTCCGGTCCGGCGCATCCGACCGCATCCGTACCGGTAATCCAATCGGCGGCGGACGCGAACGCAGCCTCCGCCACCGCCGCGGCTAATTCCAATTACCCTACCTCCGCGCCCGCGGCGGCCGCGCAGACGGCCGAAGGAATGGGGGGCGGCGGCGGCGGCGGAGGCAGGCGGAGCTTCCGCCAGACGGTGTGTCGGCACTGGTTGCGGTCGCTGTGCATGAAAGGCGACGCCTGTGGGTTCCTTCATCAGTACGACAAGTCCCGGATGCCGGTTTGCCGGTTTTTCCGCCTGTACGGGGAGTGCCGCGAGCAGGATTGCGTGTACAAACATACAAATGAAGATATCAAGGAATGCAATATGTATAAATTGGGATTTTGTCCAAACGGTCCCGATTGTAGGTATCGGCATGCAAAGCTTCCCGGACCTCCGCCTCCCATAGAAGAAGTCCTTCAGAAGATTCAGCAGTTAACTTCACACAACAGATTTTTTCAAAACCGTAATGGTCAGCATACAGATAAATCTCAGTTTCCACAAGGACCAAATGGTACACATCAAACAGGAAAACCCACAGAGGCTGGTAACAGCGTTCATCAACAGCCACAGCAGTCTCAGCAGCAGGGCAGCCAAGGTCTAGTGCAGAATATTGCCAACGGCCAGCAAAACCAACCTAGTAGGACCGCTACACCTCTGCCACAAGGAGCATCTAGGAGATATGTCCCACGTCAGCTTGTAATAACTGTTTATCCTGGGTACTTTGTGGTGAAAAGTTGCAACCGGGAGAATCTGGAGCTATCTGTACAACAAGGAGTATGGGCAACTCAGAGAAGCAATGAGGCTAAACTTAATGAAGCTTTTGAATCTGTTGAGAACGTTATTTTGATATTCTCGGTTAACAAGACCAGGCATTTTCAGGGTTGTGCAAAGATGACAACTAGAATTGGTGGCTTCGTTGGTGGAGGTAACTGGAAGCATGCTCATGGAACTGCACATTATGGACGGAATTTTGCTGTTAAATGGTTAAAGCTCTGTGAATTGTCCTTCGACAAAACTCGACATTTGAGAAACCCATACAATGAGAACTTACCAGTGAAGATAAGTAGAGACTGTCAAGAGCTGGAGCCTTCTATTGGCGAGCAGTTGGCATCATTACTCTACCTCGAGCCAGATAGTGATCTTATGGCCATCTCGGTTGCAGCAGAATTGAAACGAGAAGAGGAAAAGGCAAAGGGAGTAAACCTCGACAATGGGGCCGAAAACCCGGACATCGTACCTTTTGAAGATAACGAAGAGGAGGAAGAAGACGATGAAGAAGAAGAAAGCGAAGAAGAGGACGAAACCCCTTTCGGAGCTCAAGGCAGGGGAAGGGGTAGAGGAATGATGTGGCCCCCGCACATGCCAATGCCACGTGGCGCCCGGGGGCCTTTCCCGGGTTTGCGGGGTTTCCCCCCTAACATGATGGGGAGTGACGGGTTTTCTTACGGGCCCGTGAACCCCGATGGTTTCCCGATGGCGGACCCGTTCGGTATGGCTCCACGTGGGTTTGGGCCTTACGGGCCGAGATTCTCCGGTGATTTCCCCGGGCCTGGGCCTGGGATGATGTTCCCGGGTCGGCCGAACGGAGGGTTCGGGATGATGATGGGGCCGGGGCCGGGGCCGGGCCGGGGGCCTTTTATGGGCGGGATGGGTGTAAGAGGTGGGCGGCCGGTTGGTATGCCTCCTTTTTATCCGCCACCGCCACCGCCACCACAACAACAACCGCCCGCGCAGAACTCGAATCGGGCGAAGAGGGATCCGATGGCGCCGGGTAATGATGGGTTGGATCAAGGCAAGGGACAAGAGATTGCAGCAGATGAAGTGAGAAACCAGCAGAGAGGGAGAGGCCAACAAGAGGATCGTTATAGCGGGGGTGGAAATAGCTACAATAGGAATGATGAGAGTGAAAGCGAGGACGAGGCTCCGAGAAGGTCGAGACATGGGGAAGGGAAGAAGAAGAGGCGGAGCTTGGAGACCGATGCTACTGCGATTTCGGGTGATGTTAATTAG
Protein:  
MDDGEGGLSFDFEGGLDSGPAHPTASVPVIQSAADANAASATAAANSNYPTSAPAAAAQTAEGMGGGGGGGGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPIEEVLQKIQQLTSHNRFFQNRNGQHTDKSQFPQGPNGTHQTGKPTEAGNSVHQQPQQSQQQGSQGLVQNIANGQQNQPSRTATPLPQGASRRYVPRQLVITVYPGYFVVKSCNRENLELSVQQGVWATQRSNEAKLNEAFESVENVILIFSVNKTRHFQGCAKMTTRIGGFVGGGNWKHAHGTAHYGRNFAVKWLKLCELSFDKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSDLMAISVAAELKREEEKAKGVNLDNGAENPDIVPFEDNEEEEEDDEEEESEEEDETPFGAQGRGRGRGMMWPPHMPMPRGARGPFPGLRGFPPNMMGSDGFSYGPVNPDGFPMADPFGMAPRGFGPYGPRFSGDFPGPGPGMMFPGRPNGGFGMMMGPGPGPGRGPFMGGMGVRGGRPVGMPPFYPPPPPPPQQQPPAQNSNRAKRDPMAPGNDGLDQGKGQEIAADEVRNQQRGRGQQEDRYSGGGNSYNRNDESESEDEAPRRSRHGEGKKKRRSLETDATAISGDVN